Instrument control, image processing and analysis software.

Combine the Aurox Visionary instrument control software with one or more of a range of third party image processing and analysis software for optimum performance.

aurox confocal microscope visionary software image

The following software are available for order from Aurox, either as stand-alone units or as part of a Clarity microscopy system:

The Aurox Visionary software has been specially developed for the acquisition of live cell imaging data using the Aurox Clarity LFC unit as part of a laser free confocal microscopy system.

Designed with simplicity and ease of use at its core, the software provides a single graphical user interface, which relates device and experimental settings directly to the connected instrument hardware.

The Visionary software provides for the optimisation and control of the instrument set-up and calibration followed by the set-up and image acquisition control of the confocal microscopy experiment.

Key features of the software:

  • Instrument set-up and calibration
  • Experiment set-up and control
  • Real time confocal image quality inspection tool
  • Supports a range of digital camera manufacturer sCMOS devices, including, PCO and Andor
  • Outputs data in OME Tiff format

aurox confocal microscope Aurox Visionary

Imaris is a commercial software package from Bitplane, designed for the data visualisation, analysis, segmentation and interpretation of 3D/4D microscopy datasets.

Combining speed, precision and ease-of-use, Imaris provides a complete set of features for working with three- and four-dimensional multi-channel images of any size. Multiple volume rendering and modes, clipping planes, cross-section slices will let you create stunning animations and snapshots ready to be used in publications.


  • Search, tag, and manage your data
  • Organize and manage full experiments
  • Use premier volume rendering in 3D/4D
  • Detect objects using Spots and Surfaces
  • Interactive intuitive workflow
  • Process and visualise data acquired from almost any microscope.
  • Customisable with a wide range of additional, optional modules for specialist applications

aurox confocal microscope Bitplane Imaris

A third party software package, Fiji is a distribution of the widely used open source image processing software, ImageJ.

Fiji comes complete with a wide range of plugins used for the scientific analysis of multi-dimensional image data resulting from the life sciences.

Techniques supported:

  • Image processing
  • Colocalisation
  • Deconvolution
  • Registration
  • Segmentation
  • Tracking
  • Visualisation

Fiji is actively maintained, with regular update releases.
More information is available from

aurox confocal microscope Open source Fiji / ImageJ

Image-Pro Premier 3D is a commercial 3D image analysis software package from Media Cybernetics.

Designed for research professionals who need to view and measure structures in a range of spatial or temporal image dimensions, Image-Pro Premier 3D provides all the essential 3D analysis tools in one software package.

Key features include:

  • Automatically measure and count objects
  • Identify what to measure
  • Guided segmentation for measurement of complex 3D objects
  • Manual 3D measurements
  • 3D/4D Data Management
  • Automatically collect and analyse data from multiple experiments
  • 3D/4D high resolution image visualisation
  • 3D Clipping planes
  • 3D processing and dataset correction
  • Key frame animation movie publication

aurox confocal microscope Media Cybernetics Image-Pro Premier 3D